Commits · 4635029d81b3e7a7180412bfd72b56ce0002ee8d · biowdl / tasks

Sep 27, 2018
- Integrate caseControl into the pipeline · 4635029d
  Moustakas authored 6 years ago
  
  4635029d
- Merge remote-tracking branch 'origin/develop' into controlTreat · 6941feb1
  Moustakas authored 6 years ago
  
  6941feb1
- Merge pull request #64 from biowdl/BIOPET-1080 · 46a74f87
  Peter van 't Hof authored 6 years ago
  
  Added CaseControl tool
  Unverified
  
  46a74f87
- Update sampleconfig.wdl · 64d24abf
  Peter van 't Hof authored 6 years ago
  
  Unverified
  
  64d24abf
Sep 26, 2018
- Added CaseControl tool · e01a682c
  Peter van 't Hof authored 6 years ago
  
  e01a682c
Sep 25, 2018
- Attempt to match sample with control and call macs2 · 282dacb0
  Moustakas authored 6 years ago
  
  282dacb0
Sep 24, 2018
- Merge pull request #63 from biowdl/BIOWDL-119 · 4b87b523
  Peter van 't Hof authored 6 years ago
  
  remove link creation from CombineGVCFs
  Unverified
  
  4b87b523
- Add control sample functionality · 59ad480a
  Moustakas authored 6 years ago
  
  59ad480a
- remove link creation from CombineGVCFs · ce4cef8b
  Cats authored 6 years ago
  
  ce4cef8b
Sep 18, 2018
- Merge pull request #61 from biowdl/BIOWDL-85 · 6bab3aad
  Peter van 't Hof authored 6 years ago
  
  Switch to structs
  Unverified
  
  6bab3aad
- Added workaround for manta · 89b7851b
  ffinfo authored 6 years ago
  
  89b7851b
- Made diploid optional · 1c8b5b26
  Peter van 't Hof authored 6 years ago
  
  1c8b5b26
- added structs · 2b439234
  Peter van 't Hof authored 6 years ago
  
  2b439234
- Merge branch 'develop' into BIOWDL-85 · 4674c99c
  Peter van 't Hof authored 6 years ago
  
  Unverified
  
  4674c99c
- Merge branch 'BIOWDL-85' of https://github.com/biowdl/tasks into BIOWDL-85 · d8b75dc7
  Peter van 't Hof authored 6 years ago
  
  d8b75dc7
- Raise memory · 534cc259
  Peter van 't Hof authored 6 years ago
  
  534cc259
Sep 17, 2018
- switch flash to structs · b92acedc
  Peter van 't Hof authored 6 years ago
  
  b92acedc
- Merge branch 'BIOWDL-85' of https://github.com/biowdl/tasks into BIOWDL-85 · f6b12ca4
  Peter van 't Hof authored 6 years ago
  
  f6b12ca4
- fixed typo · 84a4fff2
  Peter van 't Hof authored 6 years ago
  
  84a4fff2
- Make bamIndexPath required · 4230206a
  Peter van 't Hof authored 6 years ago
  
  4230206a
Sep 13, 2018
- Fix version statement · 7b9b7162
  ffinfo authored 6 years ago
  
  7b9b7162
- Switch to files · 699bd083
  ffinfo authored 6 years ago
  
  699bd083
- WIP · 26ee393b
  ffinfo authored 6 years ago
  
  26ee393b
- Switch to file based md5 · 440489bc
  ffinfo authored 6 years ago
  
  440489bc
- Dynamic index searching · 85898c4d
  ffinfo authored 6 years ago
  
  85898c4d
- Fixing arguments · a702288a
  Peter van 't Hof authored 6 years ago
  
  a702288a
- Fixed names · 783783a9
  Peter van 't Hof authored 6 years ago
  
  783783a9
- Merge branch 'BIOWDL-85' of https://github.com/biowdl/tasks into BIOWDL-85 · 446a1f7a
  Peter van 't Hof authored 6 years ago
  
  446a1f7a
- fix travis file · 49a812e7
  Peter van 't Hof authored 6 years ago
  
  49a812e7
- Raised default treads · 0955c983
  Peter van 't Hof authored 6 years ago
  
  0955c983
- Fixed names · cbd2afd4
  Peter van 't Hof authored 6 years ago
  
  cbd2afd4
- switch back · 3282101e
  ffinfo authored 6 years ago
  
  3282101e
Sep 12, 2018
- Fixed names · 6de75757
  ffinfo authored 6 years ago
  
  6de75757
- changed names · b4fe827a
  ffinfo authored 6 years ago
  
  b4fe827a
- fixed import · b9c64d62
  ffinfo authored 6 years ago
  
  b9c64d62
- Change names · 7c512fbd
  ffinfo authored 6 years ago
  
  7c512fbd
- Merge pull request #62 from biowdl/BIOWDL-50 · 9ad8f00d
  Cats authored 6 years ago
  
  Add bamstats
  Unverified
  
  9ad8f00d
- Fixing validate issues · 9f02ca5a
  ffinfo authored 6 years ago
  
  9f02ca5a
- request dict · 328ae634
  Ruben Vorderman authored 6 years ago
  
  328ae634
- Fixing validate issues · 0d3ab44c
  ffinfo authored 6 years ago
  
  0d3ab44c