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6bab3aad

Unverified Commit 6bab3aad authored 6 years ago by Peter van 't Hof Committed by GitHub 6 years ago

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Merge pull request #61 from biowdl/BIOWDL-85

Switch to structs

parents 9ad8f00d 89b7851b

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Changes 18

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.travis.yml 7 additions, 4 deletions

.travis.yml
biopet/bamstats.wdl 8 additions, 6 deletions

biopet/bamstats.wdl
biopet/biopet.wdl 30 additions, 151 deletions

biopet/biopet.wdl
biopet/sampleconfig.wdl 79 additions, 0 deletions

biopet/sampleconfig.wdl
biopet/seqstat.wdl 5 additions, 4 deletions

biopet/seqstat.wdl
bwa.wdl 4 additions, 5 deletions

bwa.wdl
common.wdl 7 additions, 4 deletions

common.wdl
cutadapt.wdl 9 additions, 6 deletions

cutadapt.wdl
flash.wdl 8 additions, 3 deletions

flash.wdl
gatk.wdl 66 additions, 71 deletions

gatk.wdl
htseq.wdl 5 additions, 2 deletions

htseq.wdl
macs2.wdl 5 additions, 2 deletions

macs2.wdl
manta.wdl 31 additions, 22 deletions

manta.wdl
picard.wdl 55 additions, 50 deletions

picard.wdl
samtools.wdl 9 additions, 6 deletions

samtools.wdl
strelka.wdl 15 additions, 15 deletions

strelka.wdl
stringtie.wdl 4 additions, 2 deletions

stringtie.wdl
vardict.wdl 14 additions, 9 deletions

vardict.wdl

with 361 additions and 362 deletions

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