Commits · 33e9f85f1e7662befa4a8aa6b8cd7a0235216226 · biowdl / tasks

Aug 10, 2018
- use proper perl-style regexes · 3f54ab63
  Ruben Vorderman authored 6 years ago
  
  3f54ab63
Jul 24, 2018
- turn optional with default into mandatory with default · 6425926f
  Cats authored 6 years ago
  
  6425926f
Jul 23, 2018
- added stylish newlines · 3d8b32b2
  Ruben Vorderman authored 6 years ago
  
  3d8b32b2
- style fixes · 2b903b2b
  Ruben Vorderman authored 6 years ago
  
  2b903b2b
- fastqc to 1.0 · 39cbad54
  Ruben Vorderman authored 6 years ago
  
  39cbad54
Jun 14, 2018
- Revert "Added glob's to output files" · 691a6392
  Peter van 't Hof authored 6 years ago
  
  This reverts commit 138d3606
  691a6392
- Revert "Fixing output" · 830a39b8
  Peter van 't Hof authored 6 years ago
  
  This reverts commit 17af04e8
  830a39b8
- Fixing output · 17af04e8
  Peter van 't Hof authored 6 years ago
  
  17af04e8
- Added glob's to output files · 138d3606
  Peter van 't Hof authored 6 years ago
  
  138d3606
May 28, 2018
- move extractadaptersfastqc to biopet · 32706126
  Ruben Vorderman authored 6 years ago
  
  32706126
May 07, 2018
- evaluate outputpaths before command section · 30bfec34
  Ruben Vorderman authored 6 years ago
  
  View commits for tag phhv1assembly phhv1assembly
  
  30bfec34
Apr 10, 2018
- change memory settings · f6d9691c
  Cats authored 6 years ago
  
  f6d9691c
Apr 06, 2018
- fix the way custom memory values are handeled? · 09f9e67f
  Cats authored 6 years ago
  
  09f9e67f
Apr 05, 2018
- adjust memory · 38b1c5f1
  Cats authored 6 years ago
  
  38b1c5f1
Apr 04, 2018
- typo · fe987d91
  Cats authored 6 years ago
  
  fe987d91
- adjust memory · b0d40e66
  Cats authored 6 years ago
  
  b0d40e66
- ceil runtime memory (must be int) · c75fd8a5
  Cats authored 6 years ago
  
  c75fd8a5
- fix default memory? · b02601ad
  Cats authored 6 years ago
  
  b02601ad
- floats · 3ef4efa1
  Cats authored 6 years ago
  
  3ef4efa1
- floats · 1939a2a7
  Cats authored 6 years ago
  
  1939a2a7
- runtime adjustments · e265f172
  Cats authored 6 years ago
  
  e265f172
- runtime adjustments bwa, exractAdapters · 6b394c91
  Cats authored 6 years ago
  
  6b394c91
- add memory settings to extractAdapters · a5d63187
  Cats authored 6 years ago
  
  a5d63187
Apr 03, 2018
- add runtime settings · 93240a92
  Cats authored 6 years ago
  
  93240a92
Mar 08, 2018
- fixed glob · b3f3b5ce
  Peter van 't Hof authored 7 years ago
  
  b3f3b5ce
- Fixed output files of fastqc · e2c513a9
  Peter van 't Hof authored 7 years ago
  
  e2c513a9
Mar 01, 2018
- Adding alignment step · f91f5982
  pjvan_thof authored 7 years ago
  
  f91f5982
Feb 22, 2018
- memory to int · 75c5deaf
  Ruben Vorderman authored 7 years ago
  
  75c5deaf
- allocate extra memory to extract adapters fastqc · 00eb908d
  Ruben Vorderman authored 7 years ago
  
  00eb908d
Feb 08, 2018
- modify fastqc · b5552f5d
  Ruben Vorderman authored 7 years ago
  
  b5552f5d
Jan 29, 2018
- allow gzipped files · 4860b40d
  Ruben Vorderman authored 7 years ago
  
  4860b40d
- getConfiguration task · dce75b05
  Ruben Vorderman authored 7 years ago
  
  dce75b05
- add preCommand · 9f1537d0
  Ruben Vorderman authored 7 years ago
  
  9f1537d0
- debugged output file · 87c555a6
  Ruben Vorderman authored 7 years ago
  
  87c555a6
Jan 19, 2018
- some debugging · fa4a6785
  Ruben Vorderman authored 7 years ago
  
  fa4a6785
- some debugging · 31b9347a
  Ruben Vorderman authored 7 years ago
  
  31b9347a
- added extractAdapters task · ac34c1f8
  Ruben Vorderman authored 7 years ago
  
  ac34c1f8
- written fastqc task · eea04f4f
  Ruben Vorderman authored 7 years ago
  
  eea04f4f
Jan 18, 2018
- add new task files · b15166c3
  Ruben Vorderman authored 7 years ago
  
  b15166c3