Commits · 2fc05e3ec2b5f82732a22a5d1f8c0407a04d2d65 · biowdl / tasks

Jul 17, 2019
- update changelog · 2fc05e3e
  Ruben Vorderman authored 5 years ago
  
  2fc05e3e
- Merge remote-tracking branch 'origin/develop' into BIOWDL-279 · dda8d13c
  Ruben Vorderman authored 5 years ago
  
  dda8d13c
Jul 16, 2019
- add PULL_REQUEST_TEMPLATE · 0ffa2a41
  Ruben Vorderman authored 5 years ago
  
  0ffa2a41
Jul 15, 2019
- add allow contain · 8ed04648
  Ruben Vorderman authored 5 years ago
  
  8ed04648
- Merge pull request #120 from biowdl/BIOWDL-271 · 871a562e
  Cats authored 5 years ago
  
  add task for the chunked-scatter script
  Unverified
  
  871a562e
- Merge branch 'develop' into BIOWDL-271 · 416757fa
  Ruben Vorderman authored 5 years ago
  
  Unverified
  
  416757fa
- Merge pull request #112 from biowdl/KG-295 · 02a056f5
  Ruben Vorderman authored 5 years ago
  
  Add CNV callers
  Unverified
  
  02a056f5
Jul 12, 2019
- fix output chunked-scatter · 54f0eb2e
  Cats authored 5 years ago
  
  54f0eb2e
Jul 10, 2019
- Merge branch 'develop' into BIOWDL-271 · 39b6674d
  Cats authored 5 years ago
  
  Unverified
  
  39b6674d
- set proper docker image for chunked-scatter · 9fedcc11
  Cats authored 5 years ago
  
  9fedcc11
- add memory requirement · 157bbf9b
  Ruben Vorderman authored 5 years ago
  
  157bbf9b
- use wisestork with proper biocontainers · e69e3a9d
  Ruben Vorderman authored 5 years ago
  
  e69e3a9d
- Merge remote-tracking branch 'origin/develop' into KG-295 · 9a4b3de0
  Ruben Vorderman authored 5 years ago
  
  9a4b3de0
- Merge pull request #119 from biowdl/BIOWDL-265 · c46581cb
  Ruben Vorderman authored 5 years ago
  
  Some minor changes and small fixes
  Unverified
  
  c46581cb
Jul 09, 2019
- Merge branch 'BIOWDL-265' of https://github.com/biowdl/tasks into BIOWDL-265 · a71e83f4
  Ruben Vorderman authored 5 years ago
  
  a71e83f4
- some changes · 60ebaba0
  Ruben Vorderman authored 5 years ago
  
  60ebaba0
- fix bug · 0d2bff6a
  Ruben Vorderman authored 5 years ago
  
  0d2bff6a
- add task for chunked-scatter · 2de465dc
  Cats authored 5 years ago
  
  2de465dc
- Merge remote-tracking branch 'origin/develop' into BIOWDL-265 · cd8b5b4d
  Ruben Vorderman authored 5 years ago
  
  cd8b5b4d
- fix bug · b819c30c
  Ruben Vorderman authored 5 years ago
  
  b819c30c
Jul 08, 2019
- small fixes · 3ec3f6b1
  Ruben Vorderman authored 5 years ago
  
  3ec3f6b1
Jul 03, 2019
- Merge pull request #118 from biowdl/BIOWDL-247 · b8694fad
  Ruben Vorderman authored 5 years ago
  
  DockerImages for all the stuff!
  Unverified
  
  b8694fad
- fix · 68061dfd
  Ruben Vorderman authored 5 years ago
  
  68061dfd
- fix output bam · 0c655aeb
  Ruben Vorderman authored 5 years ago
  
  0c655aeb
- valid wdl · b025aec9
  Ruben Vorderman authored 5 years ago
  
  b025aec9
- fix samtools · a5010d88
  Ruben Vorderman authored 5 years ago
  
  a5010d88
- improve indexing · dde60f45
  Ruben Vorderman authored 5 years ago
  
  dde60f45
Jul 02, 2019
- universal indexing · a558d5bf
  Ruben Vorderman authored 5 years ago
  
  a558d5bf
- simpler mkdir · ed5ef05d
  Ruben Vorderman authored 5 years ago
  
  ed5ef05d
- address strelka and manta changes · d8d8af25
  Ruben Vorderman authored 5 years ago
  
  d8d8af25
- request less memory · f514e420
  Ruben Vorderman authored 5 years ago
  
  f514e420
- Merge branch 'develop' into BIOWDL-247 · f6161e3b
  Ruben Vorderman authored 5 years ago
  
  Unverified
  
  f6161e3b
- dockerImage gffcompare.wdl · 9980542f
  Ruben Vorderman authored 5 years ago
  
  9980542f
- dockerImage for gffread and CPAT · 0eee972f
  Ruben Vorderman authored 5 years ago
  
  0eee972f
Jul 01, 2019
- make sure outputpath exists · abe26c61
  Ruben Vorderman authored 5 years ago
  
  abe26c61
- Merge pull request #117 from Amfgcp/panel_of_normals · f2be4091
  Cats authored 5 years ago
  
  add panel of normals option to mutect2
  Unverified
  
  f2be4091
- add panel of normals option to mutect2 · 2acfd5aa
  António Paulo authored 5 years ago
  
  2acfd5aa
Jun 27, 2019
- Merge branch 'develop' into KG-295 · 14a0d710
  Ruben Vorderman authored 5 years ago
  
  Unverified
  
  14a0d710
- dockerimage htseq collect-collumns · adb969ec
  Ruben Vorderman authored 5 years ago
  
  adb969ec
- remove struct · 515c860d
  Ruben Vorderman authored 5 years ago
  
  515c860d