Commits · 1e66cc029dd28d1afb4aa64c894c732c6d0a7655 · biowdl / tasks

Feb 20, 2020
- add changelog · 1e66cc02
  Ruben Vorderman authored 5 years ago
  
  1e66cc02
- ensure output dir exists · 368d1264
  Ruben Vorderman authored 5 years ago
  
  368d1264
Feb 12, 2020
- Merge pull request #187 from biowdl/DavyCats-patch-1 · b9ad171e
  Ruben Vorderman authored 5 years ago
  
  fix CombineVariants docker image
  b9ad171e
- fix CombineVariants docker image · 5388c793
  Cats authored 5 years ago
  
  5388c793
- Merge pull request #186 from biowdl/BIOWDL-405 · 42f89858
  Ruben Vorderman authored 5 years ago
  
  Add license headers to all the files.
  42f89858
- add copyright header to gffcompare · d267afb1
  Ruben Vorderman authored 5 years ago
  
  d267afb1
- update scripts · 38be15dd
  Ruben Vorderman authored 5 years ago
  
  38be15dd
- update scripts · 150589a9
  Ruben Vorderman authored 5 years ago
  
  150589a9
Feb 11, 2020
- update changelog · fd50c034
  Ruben Vorderman authored 5 years ago
  
  fd50c034
- update scripts · 9db6d9c3
  Ruben Vorderman authored 5 years ago
  
  9db6d9c3
- add license headers · 407435d8
  Ruben Vorderman authored 5 years ago
  
  407435d8
Feb 06, 2020
- Merge pull request #185 from biowdl/BIOWDL-400 · c8ba763e
  Ruben Vorderman authored 5 years ago
  
  Combine reorderedGlobbedScatters and scatterRegions. Add pedigree input.
  c8ba763e
- simplify the scatter stuff · a2da269c
  Ruben Vorderman authored 5 years ago
  
  a2da269c
- update changelog · 4e27d421
  Ruben Vorderman authored 5 years ago
  
  4e27d421
- Merge remote-tracking branch 'origin/develop' into BIOWDL-400 · 3613a7e4
  Ruben Vorderman authored 5 years ago
  
  3613a7e4
- add parameter_meta · 2ba6443a
  Ruben Vorderman authored 5 years ago
  
  2ba6443a
- add pedigree to GenotypeGVCF · 9fa422f4
  Ruben Vorderman authored 5 years ago
  
  9fa422f4
- add pedigree file · f377d14e
  Ruben Vorderman authored 5 years ago
  
  f377d14e
- scatterregions always outputs ordered scatters · f25df1ae
  Ruben Vorderman authored 5 years ago
  
  f25df1ae
- Merge pull request #182 from biowdl/UMI-tools · c49b71cd
  Cats authored 5 years ago
  
  add umi-tools
  c49b71cd
- update changelog · 483882f9
  Cats authored 5 years ago
  
  483882f9
- fix lint script · 8abdaf2a
  Cats authored 5 years ago
  
  8abdaf2a
- add memory paramter_meta for umitools dedup · fecdeb7c
  Cats authored 5 years ago
  
  fecdeb7c
- update scripts submodule · 651acbe3
  Cats authored 5 years ago
  
  651acbe3
Feb 04, 2020
- Merge remote-tracking branch 'origin/develop' into UMI-tools · 38f56c02
  Cats authored 5 years ago
  
  38f56c02
- increase umi dedup memory · e55983c0
  Cats authored 5 years ago
  
  e55983c0
- increase memory of umitools dedup · 7ca9cdc3
  Cats authored 5 years ago
  
  7ca9cdc3
Feb 03, 2020
- Merge pull request #184 from biowdl/BIOWDL-396 · 9d62a9d9
  Ruben Vorderman authored 5 years ago
  
  Changes for the GATK-variantcalling pipeline.
  9d62a9d9
- Merge branch 'develop' into BIOWDL-396 · c296af83
  Ruben Vorderman authored 5 years ago
  
  c296af83
- Merge pull request #183 from biowdl/BIOWDL-395 · 9d3d70bb
  Jasper Boom authored 5 years ago
  
  BIOWDL-395: Add Centrifuge specific Krona task
  9d3d70bb
- correct mistake · 1084b282
  Ruben Vorderman authored 5 years ago
  
  1084b282
- update changelog · 39694df0
  Ruben Vorderman authored 5 years ago
  
  39694df0
- update parameter_meta · 9af750f5
  Ruben Vorderman authored 5 years ago
  
  9af750f5
- Update CHANGELOG. · ac282470
  JasperBoom authored 5 years ago
  
  ac282470
- Update Krona container. · 48ac569f
  JasperBoom authored 5 years ago
  
  48ac569f
- add parameter_meta · 93859b9e
  Ruben Vorderman authored 5 years ago
  
  93859b9e
- tar the genomicsdbworkspace path · 1a51a354
  Ruben Vorderman authored 5 years ago
  
  1a51a354
- Merge remote-tracking branch 'origin' into BIOWDL-396 · 20b83d3b
  Ruben Vorderman authored 5 years ago
  
  20b83d3b
Jan 31, 2020
- fix missing directory and read2output umitools · 75903be3
  Cats authored 5 years ago
  
  75903be3
- add genomicsDBImport · be34af2f
  Ruben Vorderman authored 5 years ago
  
  be34af2f