Commits · 0023ed3eff49eff9769dca5d5e2155b43a8e0ab4 · biowdl / tasks

Feb 24, 2020
- add bedregions input · 0023ed3e
  Ruben Vorderman authored 5 years ago
  
  0023ed3e
- add selectvariants tasks · 996a5fef
  Ruben Vorderman authored 5 years ago
  
  996a5fef
- add rtg vcfeval and rtg format · 1166aafc
  Ruben Vorderman authored 5 years ago
  
  1166aafc
- add gatk variantfiltration task · accc4662
  Ruben Vorderman authored 5 years ago
  
  accc4662
Feb 20, 2020
- Merge pull request #190 from biowdl/fixbwakit · b5b9f57c
  Ruben Vorderman authored 5 years ago
  
  Fix error in bwakit where the output directory was not created.
  Unverified
  
  b5b9f57c
- Merge remote-tracking branch 'origin/develop' into fixbwakit · 25b4212d
  Ruben Vorderman authored 5 years ago
  
  25b4212d
- add changelog · 1e66cc02
  Ruben Vorderman authored 5 years ago
  
  1e66cc02
- ensure output dir exists · 368d1264
  Ruben Vorderman authored 5 years ago
  
  368d1264
Feb 13, 2020
- Merge pull request #189 from biowdl/fixCleverMeta · 863bd600
  Cats authored 5 years ago
  
  fix clever parameter_meta
  Unverified
  
  863bd600
- fix clever parameter_meta · c6b9a8e4
  cedrick authored 5 years ago
  
  c6b9a8e4
- Merge pull request #188 from biowdl/addVT · d76e8fe6
  Cats authored 5 years ago
  
  Add vt
  Unverified
  
  d76e8fe6
- modify copyright year in vt.wdl · 4642c1c7
  cedrick authored 5 years ago
  
  4642c1c7
- update submodule tasks · 2379e76a
  cedrick authored 5 years ago
  
  2379e76a
- update CHANGELOG.md · 47bcc7b8
  cedrick authored 5 years ago
  
  47bcc7b8
- minor fix · 568df5ae
  cedrick authored 5 years ago
  
  568df5ae
- Merge pull request #116 from biowdl/add_sv_tasks · b7fe370d
  Cats authored 5 years ago
  
  Add sv tasks
  Unverified
  
  b7fe370d
- add paramter_meta · e2b0285e
  cedrick authored 5 years ago
  
  e2b0285e
- change cleveroutputpath category from required to common · 06d37a72
  cedrick authored 5 years ago
  
  06d37a72
- modify outputPath category from required to common · 19736000
  cedrick authored 5 years ago
  
  19736000
- Merge branch 'develop' into add_sv_tasks · 44e39a31
  cedrick authored 5 years ago
  
  44e39a31
- add default outputpath · ec719411
  cedrick authored 5 years ago
  
  ec719411
- add vt task · ba638b55
  cedrick authored 5 years ago
  
  ba638b55
Feb 12, 2020
- remove outputPathBamIndex as input · 835bea58
  cedrick authored 5 years ago
  
  835bea58
- add default outputPath · 91a5cdd2
  cedrick authored 5 years ago
  
  91a5cdd2
- Merge pull request #187 from biowdl/DavyCats-patch-1 · b9ad171e
  Ruben Vorderman authored 5 years ago
  
  fix CombineVariants docker image
  Unverified
  
  b9ad171e
- fix parameter_meta · 64d7837d
  cedrick authored 5 years ago
  
  64d7837d
- fix CombineVariants docker image · 5388c793
  Cats authored 5 years ago
  
  Unverified
  
  5388c793
- fix parameter_meta · 1a77dc8f
  cedrick authored 5 years ago
  
  1a77dc8f
- fix parameter_meta · 3ec2d054
  cedrick authored 5 years ago
  
  3ec2d054
- add copyright header in survivor.wdl · 18a18df8
  cedrick authored 5 years ago
  
  18a18df8
- remove string sample from survivor.wdl · 976d9e6e
  cedrick authored 5 years ago
  
  976d9e6e
- add copyright header · ce0699c2
  cedrick authored 5 years ago
  
  ce0699c2
- merge tasks · 98198c4c
  cedrick authored 5 years ago
  
  98198c4c
- Merge pull request #186 from biowdl/BIOWDL-405 · 42f89858
  Ruben Vorderman authored 5 years ago
  
  Add license headers to all the files.
  Unverified
  
  42f89858
- add header to CPAT · 9ac79200
  cedrick authored 5 years ago
  
  9ac79200
- add copyright header in CPAT · 9fcd6da0
  cedrick authored 5 years ago
  
  9fcd6da0
- update submodule scripts · ca7b9715
  cedrick authored 5 years ago
  
  ca7b9715
- add copyright header to gffcompare · d267afb1
  Ruben Vorderman authored 5 years ago
  
  d267afb1
- update scripts · 38be15dd
  Ruben Vorderman authored 5 years ago
  
  38be15dd
- update scripts · 150589a9
  Ruben Vorderman authored 5 years ago
  
  150589a9