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Commit aca22619 authored by cedrick's avatar cedrick
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removed memort multiplier from picard

parent 7823ef99
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......@@ -618,14 +618,14 @@ task RenameSample {
File inputVcf
String outputPath
String newSampleName
Int memory = 8
Float memoryMultiplier = 3.0
String memory = "24G"
String javaXmx = "8G"
}
command {
set -e
mkdir -p "$(dirname ~{outputPath})"
picard -Xmx~{memory}G \
picard -Xmx~{javaXmx} \
RenameSampleInVcf \
I=~{inputVcf} \
O=~{outputPath} \
......@@ -638,7 +638,7 @@ task RenameSample {
runtime {
docker: dockerImage
memory: ceil(memory * memoryMultiplier)
memory = memory
}
}
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