Fixing commandline arguments

86aebe5b · pjvan_thof · 545cdb47 · 86aebe5b
Commit 86aebe5b authored 6 years ago by pjvan_thof
--- a/gatk.wdl
+++ b/gatk.wdl
@@ -128,7 +128,6 @@ task CombineGVCFs {

        if [ ${length(gvcfFiles)} -gt 1 ]; then
            ${toolCommand} \
-            -Xmx${mem}G -jar ${gatkJar} \
             CombineGVCFs \
             -R ${refFasta} \
             -O ${outputPath} \