From 86aebe5b74de4be58db9656a400cb733cd020e6b Mon Sep 17 00:00:00 2001
From: pjvan_thof <pjrvanthof@gmail.com>
Date: Mon, 18 Jun 2018 16:36:10 +0200
Subject: [PATCH] Fixing commandline arguments
---
gatk.wdl | 1 -
1 file changed, 1 deletion(-)
diff --git a/gatk.wdl b/gatk.wdl
index d54277b..18829f1 100644
--- a/gatk.wdl
+++ b/gatk.wdl
@@ -128,7 +128,6 @@ task CombineGVCFs {
if [ ${length(gvcfFiles)} -gt 1 ]; then
${toolCommand} \
- -Xmx${mem}G -jar ${gatkJar} \
CombineGVCFs \
-R ${refFasta} \
-O ${outputPath} \
--
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