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Commit 631b5dfa authored by Ruben Vorderman's avatar Ruben Vorderman
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fix view task

parent 86cd2038
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......@@ -37,9 +37,9 @@ task View {
set -e
mkdir -p "$(dirname ~{outputPath})"
bcftools view \
~{inputFile} -o ~{outputPath} \
-o ~{outputPath} \
-O ~{outputType} \
-l ~{compressionLevel}
-l ~{compressionLevel} \
~{inputFile}
bcftools index --tbi ~{outputPath}
......
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