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Commit 548cbce2 authored by Ruben Vorderman's avatar Ruben Vorderman
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better memory management in spades

parent f8555ebe
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2 merge requests!9Changes for virus assembly pipeline,!10Extra tasks required for assembly.
......@@ -56,7 +56,7 @@ task spades {
${true="--disable-rr" false="" disableRepeatResolution } \
${"--dataset " + dataset } \
${"--threads " + threads } \
${"--memory " + memoryGb } \
${"--memory " + memoryGb * threads } \
${"-k " + k } \
${"--cov-cutoff " + covCutoff } \
${"--phred-offset " + phredOffset }
......
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