Skip to content
Snippets Groups Projects
Commit 4c0b9385 authored by Ruben Vorderman's avatar Ruben Vorderman
Browse files

SamToFastq needs high memory

parent 40852ab1
No related branches found
No related tags found
1 merge request!11Changes needed for the iterative assembly pipeline
......@@ -161,7 +161,7 @@ task SamToFastq {
String picard_jar
Float? memory
Float? memoryMultiplier
Int mem = ceil(select_first([memory, 4.0]))
Int mem = ceil(select_first([memory, 16.0])) # High memory default to avoid crashes.
command {
set -e -o pipefail
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment