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biowdl
tasks
Commits
49a812e7
Commit
49a812e7
authored
6 years ago
by
Peter van 't Hof
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fix travis file
parent
3282101e
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!61
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.travis.yml
+1
-1
1 addition, 1 deletion
.travis.yml
biopet/seqstat.wdl
+2
-0
2 additions, 0 deletions
biopet/seqstat.wdl
with
3 additions
and
1 deletion
.travis.yml
+
1
−
1
View file @
49a812e7
...
...
@@ -4,6 +4,6 @@ script:
-
export CROMWELL_VERSION=34
# - wget https://github.com/broadinstitute/cromwell/releases/download/$CROMWELL_VERSION/womtool-$CROMWELL_VERSION.jar
-
wget https://barmsijs.lumc.nl/womtool-35-a7ae2d8-SNAP.jar
-
for F in *.wdl; do echo $F; java -jar womtool-*.jar validate $F; done
-
for F in
`find -name "
*.wdl
"`
; do echo $F; java -jar womtool-*.jar validate $F; done
-
'
if
[
"$TRAVIS_PULL_REQUEST"
!=
"false"
];
then
git
submodule
foreach
--recursive
git
checkout
$TRAVIS_BRANCH
&&
git
submodule
foreach
--recursive
git
pull;
fi'
-
"
git
diff
--exit-code
||
(echo
ERROR:
Git
changes
detected.
Please
update
submodules
&&
exit
1)"
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biopet/seqstat.wdl
+
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−
0
View file @
49a812e7
...
...
@@ -2,6 +2,8 @@ version 1.0
# Copyright Sequencing Analysis Support Core - Leiden University Medical Center 2018
import "../common.wdl" as common
task Generate {
input {
String? preCommand
...
...
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