fix output samtools index

372db4ea · Cats · 7d3590e6 · 372db4ea
Commit 372db4ea authored 6 years ago by Cats
--- a/samtools.wdl
+++ b/samtools.wdl
 task Index {
    String? preCommand
    File bamFilePath
-
-    String bamIndexPath = bamFilePath + ".bai"
+    String bamIndexPath

    command {
        set -e -o pipefail