remove duplicate jar and mem

2f1e467c · Cats · 0696ab06 · 2f1e467c
Commit 2f1e467c authored 6 years ago by Cats
--- a/gatk.wdl
+++ b/gatk.wdl
@@ -25,7 +25,6 @@ task ApplyBQSR {
        set -e -o pipefail
        ${preCommand}
        ${toolCommand} \
-        -Xms${mem}G -jar ${gatkJar} \
          ApplyBQSR \
          --create-output-bam-md5 \
          --add-output-sam-program-record \