Missing chromosomes
Migrated from GitLab #7
Apparently we always missed a few chromosome definitions used by the transcript mappings. They are:
hg18
chr13_random
chr2_random
chr3_random
chr19_random
chr4_random
chr7_random
chr9_random
chr8_random
chr5_h2_hap1
chrX_random
chr21_random
chr16_random
chr15_random
chr17_random
chr6_random
chr5_random
chr22_random
chr6_qbl_hap2
chr1_random
hg19
chr4_gl000193_random
chrUn_gl000228
chr4_gl000194_random
chrUn_gl000220
chrUn_gl000222
chr19_gl000209_random
chrUn_gl000211
chrUn_gl000212
chr17_gl000205_random
chrUn_gl000219
chrUn_gl000218
chr7_gl000195_random
And for GRCh38 we don't have any chromosomes defined yet besides the standard ones, see merge request !20.