The genbank parser fails for certain references
Created by: mihailefter
When trying to add mRNA and CDS features to their corresponding gene lists, if there is no gene feature present in the record with the same name as found in the sub-features, the parser breaks.
For UD_150167851083 such a case occurs:
gene <1..13127
/gene="UGT1A"
/gene_synonym="GNT1; UGT; UGT1; UGT1A@"
/db_xref="HGNC:HGNC:12529"
mRNA join(<6862..6993,7677..7764,8048..8267,12090..13127)
/gene="UGT1A1"
/gene_synonym="BILIQTL1; GNT1; HUG-BR1; UDPGT; UDPGT 1-1;
UGT1; UGT1A"
/db_xref="HGNC:HGNC:12530"
/db_xref="MIM:191740"
Most likely the mRNA
should be added to the gene
, but the /gene
qualifier value is different between the two.