Try to handle deletions over multiple splice sites
Created by: mutalyzerbot
Original ticket: https://humgenprojects.lumc.nl/trac/mutalyzer/ticket/35 Original date: 2011/02/25 Original reporter: m DOT vermaat DOT hg AND lumc DOT nl
There are few cases of deletions that hit a splice site where we are able to come up with a sensible result (instead of aborting).
For example, the deletion of an entire exon, or the deletion of an end and a start of two subsequent exons (this would join them).
The following two examples of a deleted region should be handled:
-----=========------======------=======------========-----
\_________1___________/
\_____2_____/