Short variant description not accepted
Created by: mutalyzerbot
Original ticket: https://humgenprojects.lumc.nl/trac/mutalyzer/ticket/29 Original date: 2011/02/10 Original reporter: *johnpaul DOT plazzer AND gmail DOT COOM *
if a deletion of more than 1 base is entered, but only the start nucleotide position is entered, mutalyzer will not accept it. Is it possible to count the number of bases deleted to determine the end position, therefore allowing mutalyzer to calculate the correct nomenclature?
Example: NG_007109.1(MLH1_v001):c.157delGAGG
output: GAGG not found at position 8172, found G instead
NG_007109.1(MLH1_v001):c.157_160delGAGG will produce the correct output.