Transcript name batch run
Created by: mutalyzerbot
Original ticket: https://humgenprojects.lumc.nl/trac/mutalyzer/ticket/20 Original date: 2011/01/27 Original reporter: i DOT c DOT lugtenburg AND lumc DOT nl
In the current setup getGeneAndTranscript can only gather 1 transcript name at a time, the problem with this is that when i have a list of transcripts (DMD for example), mutalyzer then has to parse the whole genbank file for each transcript.
If i want all names of the DMD transcripts it takes about 2 minutes (112 seconds to be exact). This can be very annoying if an LOVD user is only waiting for a gene create form to be built. So my suggestion would be to make a batch service which can for example get all transcripts and their names from a genbank file.
EXAMPLE: (something like) getTranscriptsAndInfo('build'='hg19', 'genomicReference'='UD_127779853039')