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Gerben Stouten authored
Mutalyzer.py * Updated the batch output generator handler.py * Make result file downloadable webservice.py * Make webservice compatible with the new Mapper module VarInfo.py * Updated functions to reflect new Mapper module index.py * Added a redirect option to move get messages to the check form * Updated check to use the Session from redirect * implented __checkInt to catch user errors in upload * Added a progress option to get updates about batch progress * updated batch to show batch progress after submit #Templates interface.js * Added the AJAX request to get a batch progress counter * Started the linkify to change all Mutalyzer instances to clickable links batch.html * Added a hidden form to support the batch progress gbupload.html * Display Errors #Modules Output.py * Added the getMessagesWithErrorCode LRGParser.py * Made the seq a BioSequence for the restriction function Retriever.py * Added BatchFlags support to prevent jobs to hang at the same problem * Updated some returnvalues to reflect errors Scheduler.py * Implemented the Flags to skip or alter other batch entries * Cleaned up the nameCheckerbatch significantly * Added a try/except clause around the namechecker to prevent batchhangs * Changed output fileextension to txt Mapper.py * Cleaned up Module * mainTranscript function updated to reflect webservice needs * Correct errors when retrieving fields from DB in _FieldsFromDb Db.py * Impemented entriesLeftForJob to get info about how a job is doing * Added updateBatchDb and skipBatchDb to skip/alter batch entries git-svn-id: https://humgenprojects.lumc.nl/svn/mutalyzer/trunk@71 eb6bd6ab-9ccd-42b9-aceb-e2899b4a52f1
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