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  • crossmap_module
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Created with Raphaël 2.2.029Mar201412128Feb2120181615131Jan302928272625221513830Dec28191475225Nov2423141084128Oct27262120121110765430Sep292726201914131198765224Aug2322191816327Jul2625212019121128Jun2721201923May20161321Apr1813121187654131Mar30292825242321171514828Feb2524211716231Jan28272625201918171412765329Dec28201016Nov1211821Oct322Sep9331Aug2726181695428Jul272619730Jun28252322181419May1812321Apr1526Feb1932131Dec302330Nov171121Oct9128Aug28JulFix crossmapping on reverse strand if CDS start is exon startAdd another test case by S Venkata Suresh KumarMore Crossmap testsMove tests in Crossmap.py to unit testsBetter error message if no gene is specifiedAuto reconnect to MySQL serverUse UD slices in unit testsBe less verbose in Entrez errorsBetter descriptions on chromosomeHandle errors from updated Entrez APIOpen development for 2.0.beta-17Tag 2.0.beta-16mutalyzer-2.0.b…mutalyzer-2.0.beta-16Release 2.0.beta-16Fix CDS start and stop in mapping databaseTypoFix del with deleted sequence length as argumentOpen development for 2.0.beta-16Tag 2.0.beta-15mutalyzer-2.0.b…mutalyzer-2.0.beta-15Release 2.0.beta-15Added disclaimer and documentation.Unit tests for describe moduleImplement copyright years as package constantFix for EFetch Version 2.0 releaseAdded a standardised description length to the describe module.Added the Variant Description Extractor as a web interface.Entrez dbSNP api suddenly returns other XML structureFirst version of an abstract for the ESHG 2012.Add chromosomal positions to getTranscriptsAndInfo webservice (#86)Added a new method for rolling a substring.Fix chromosome slicing on reverse complementFix bug introduced with r471Describe NOP variants with = (#88)Reference sequence info in runMutalyzer response (#87)Unit tests for GI referencesFinished the HGVS DNA description prototype.Add checkSyntax to SOAP toolsFix mapping info for genes mapped to more than one chromosome- Made a member function of RawVar() called description() that gives the HGVSFinished generating the allele description.Found a good criterium for the recursion, started adding an allele description
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