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Commit 1c012dc9 authored by Vermaat's avatar Vermaat
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Only run import-reference on mitochondrial refs

parent cbc29164
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...@@ -860,6 +860,9 @@ def import_from_reference(assembly, reference): ...@@ -860,6 +860,9 @@ def import_from_reference(assembly, reference):
retriever = Retriever.GenBankRetriever(output) retriever = Retriever.GenBankRetriever(output)
record = retriever.loadrecord(reference) record = retriever.loadrecord(reference)
if record.molType != 'm':
raise ValueError('Only mitochondial references are supported')
select_transcript = len(record.geneList) > 1 select_transcript = len(record.geneList) > 1
for gene in record.geneList: for gene in record.geneList:
......
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