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  • Laros's avatar
    407fbe2b
    Mutalyzer.py: · 407fbe2b
    Laros authored
    - Made the ``multiple transcripts found'' message more descriptive.
    - Made the ``in frame stop codon'' check work for all organisms (and
      organelles).
    
    GBparser.py:
    - Added mitochondrial DNA to the list of possible molecular types to be
      checked, it will be treated like genomic DNA.
    - Allowed genes without CDS list or mRNA list (only a CDS location) as a
      genomic description only if there are no other CDS's for that gene. 
    
    GenRecord.py:
    - Fixed a bug in the naming of the link method (it should also apply when mRNA
      is constructed from a CDS location only).
    
    
    git-svn-id: https://humgenprojects.lumc.nl/svn/mutalyzer/trunk@87 eb6bd6ab-9ccd-42b9-aceb-e2899b4a52f1
    407fbe2b
    History
    Mutalyzer.py:
    Laros authored
    - Made the ``multiple transcripts found'' message more descriptive.
    - Made the ``in frame stop codon'' check work for all organisms (and
      organelles).
    
    GBparser.py:
    - Added mitochondrial DNA to the list of possible molecular types to be
      checked, it will be treated like genomic DNA.
    - Allowed genes without CDS list or mRNA list (only a CDS location) as a
      genomic description only if there are no other CDS's for that gene. 
    
    GenRecord.py:
    - Fixed a bug in the naming of the link method (it should also apply when mRNA
      is constructed from a CDS location only).
    
    
    git-svn-id: https://humgenprojects.lumc.nl/svn/mutalyzer/trunk@87 eb6bd6ab-9ccd-42b9-aceb-e2899b4a52f1