-
Laros authored
- Made the ``multiple transcripts found'' message more descriptive. - Made the ``in frame stop codon'' check work for all organisms (and organelles). GBparser.py: - Added mitochondrial DNA to the list of possible molecular types to be checked, it will be treated like genomic DNA. - Allowed genes without CDS list or mRNA list (only a CDS location) as a genomic description only if there are no other CDS's for that gene. GenRecord.py: - Fixed a bug in the naming of the link method (it should also apply when mRNA is constructed from a CDS location only). git-svn-id: https://humgenprojects.lumc.nl/svn/mutalyzer/trunk@87 eb6bd6ab-9ccd-42b9-aceb-e2899b4a52f1
Laros authored- Made the ``multiple transcripts found'' message more descriptive. - Made the ``in frame stop codon'' check work for all organisms (and organelles). GBparser.py: - Added mitochondrial DNA to the list of possible molecular types to be checked, it will be treated like genomic DNA. - Allowed genes without CDS list or mRNA list (only a CDS location) as a genomic description only if there are no other CDS's for that gene. GenRecord.py: - Fixed a bug in the naming of the link method (it should also apply when mRNA is constructed from a CDS location only). git-svn-id: https://humgenprojects.lumc.nl/svn/mutalyzer/trunk@87 eb6bd6ab-9ccd-42b9-aceb-e2899b4a52f1