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Created with Raphaël 2.2.027Jun242120171514131087632131May302927262524232019181715141312111098765432130Apr29282726252221181615141312111087654131Mar3029Remove unused importsFixed removing of files on test timeAdded more testing to gearsSet defaultsClean up the possible run modesadd test for WipeReads, check on instance in Gentrapexample pomexample dependsFixing WipeReadsRemove unused importChanged test for gearsMerge branch 'fix-gentrap_default_aligner' into 'develop' Fixed docsFixed default aligner in GentrapFixed testAdded testing for aligner in gentrapAdded gff to gtf stepMerge branch 'fix-vep-flag-message' into 'develop' Added docsFixed biom to kronamatch message with codeAdded a skip option in merge otu maps toolAdded report to qiime open referenceAdded open reference methodATAC seq configDisable default library callingfix output dir of pngsFix image size for whole genome plotFixed output files nameRegister outputfiles for reporting.Merge branch 'feature-idsort_htseq' into 'develop' Adding more loggingMerge remote-tracking branch 'remotes/origin/develop' into feature-downloadsample_gearsMerge branch 'fix-smallrna-defaultsettings' into 'develop' Remove unused importsMerge branch 'fix-memory' into 'develop' Merge branch 'fix-sample_flexiprep' into 'develop' Style fixesAdded test for no sample to flexiprepAdded test for no sample