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Created with Raphaël 2.2.024Nov232221201918171614111098754231Oct282726252421171413121110654329Sep2827262221201917161513102131Aug2625242322211817151110954129Jul28262522212019141387654129Jun2827242120171514131087632131May30292726252423201918171514131211Added remove of temp fileMerge remote-tracking branch 'remotes/github/develop' into biopet-biosfix typostyle fixesadd to kopisuadd xhmm methoddepthofcoverage wrappertest for summary parsing of xcnv filexhmm discover stats filexhmm genotype wrapperxhmm discover wrapperxhmm normalize wrapperxhmm pca wrapperxhmm matrixmergegatkdepths wrapperXHMM abstract classfix BIOPET-464Fixing buttonsAdded clipping and mapping quality to multisamplemappingreportFixed tsv parsingFixed typoAdded Centrifuge to list of available options, included the -jobQueue all.q optionFixed errorFixed bugAdding clipping and mapping quality plots to reportFormat fixesImplement new methodsAdded common functionsMerge branch 'feature_annotation_versions' into 'develop' Added a bit more docs to argAdded centrifuge to docsMerge branch 'fix-BIOPET-353' into 'develop' Explict test noExceptionChanged to smaller and readable testAdded text to argumentsAdd bamstats to summaryFix output filesSimplify lineplot codeChanged reports summary valuesAdding mapping quality and clipping stats to summary