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Created with Raphaël 2.2.028Dec2625242322211817161514131110764330Nov29272625242320191817161211109876543231Oct30292827262523222120191615141312987652130Sep292827252423222118Fixed scatteringFix summary jobsAdded QC page to gears reportAdded krona plot for cqiime closed to gears reportAdded template for biom to kronaChanges nameAdded merge output of qiimeClosedChanged file namesAdding summary to qiime closedAdded multisample krona plotSwitch to krona plotsAdded krona web dependenciesAdded unclasified readsAdd biom to krona methodMerge branch 'develop' into feature-vardaAdded whitespaceAdded a prettyXmlPrinterAdded sorting for samplesAdded function to convert kraken to krona outputMerge branch 'fix-issue_248' into 'develop' Style fixesFix issue #248Merge branch 'fix-indelrealigner' into 'develop' Fix indelrealignerSwitch shiva to multisample mappingAdded files to summaryAdd bam linkingAdding merge strategiesAdded pipeline to executableInit setup for multisample mapping pipelineAdded tool for merging otu mapsAdded properties for debugingMerge branch 'feature-bowtie2' into 'develop' Change back to getAdd settingsFixed double flexiprepRemove unneeded if statementFixed sample and lib id for flexiprepFix sample IDsMore fail safe