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Created with Raphaël 2.2.011Mar1098765432127Feb2624231918171615141312111096Fix missing metrics accumulation level default valueUpdate requirement message in ShivaUpdate licensesBump version to 0.3.0-RC1Fix missing read group assignment for GSNAP and TopHatMerge branch 'patch-bam2wig' into 'develop'changed .bigwig extension to .bwreleas notes modificationsMerge branch 'patch-toucan' into 'develop'removing commented out linesthreads in VEP wrapper for ToucanMerge branch 'feature-gentrap' into 'develop'Various fixes for cluster compatibilityMerge branch 'develop' into feature-gentrapMerge branch 'patch-genotyper' into 'develop'Fix scattercountsEnsure correct config nameMore missing executables configAdd missing mock executable for testingMerge branch 'patch-aln_wrapper_threads' into 'develop'Add missing mock bam2wig executables in GentrapTestFix wrong Cufflinks threadsFix wrong threads setting in Star wrapperFix wrong threads setting in Bowtie and Bwa wrappersFix missing wiggle jobsFix wrong threads setting in TopHat wrapperFix wrong threads setting in GSNAP wrapperMerge branch 'feature-test_coverage' into 'develop'Update wrong output file namesUpdate unit test for GentrapFix errors caused by mergingMerge branch 'patch-toucan' into 'develop'Report updateMerge from develop, edit yamsvp to use multisample and summaryMerge branch 'develop' into feature-gentrapFormatting updatesFix wrong parent for Basty in the pom.xml fileRemove user configKopisu - FreeC only]Fix output directory path in Toucan