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biopet.biopet
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43fc01cd5eb5afebea216c1cce0a98838e7e0ffc
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Branches
12
biopet-bios
develop
epic-BIOPET-669
example-tarextract
fix-BIOPET-245
fix-BIOPET-593
fix-BIOPET-724
fix-BIOPET-728
fix-BIOPET-730
fix-BIOPET-782
gonl-GRCh38
master
default
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19
v0.9.0
v0.8.0
BIOS
v0.7.0
v0.6.0
v0.5.0
v0.4.0
v0.4.0-RC2
v0.4.0-RC1
v0.3.2
v0.3.1
v0.3.0
v0.2.0
start-feature-branching
v0.1.4
v0.1.2
v0.1.1
v0.1.0
0.1.0
31 results
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Created with Raphaël 2.2.0
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Merge branch 'develop' into feature-summary
add tool to executable
Changed executables for summary
Added Markduplicates to summary
Merge branch 'develop' into feature-gentrap
Merge branch 'patch-flagstat_dirs' into 'develop'
Remove version from summary and rename data to stats
Rename data to settings
Add Cufflinks blind mode job and output files
Add Cufflinks guided mode job and output files
Override default sample directory path
Add Cufflinks strict mode job and output files
Fix picard summaries
Make idSortingJob optional
Update cuffquant wrapper with correct version exit codes
Fix outputDirs for samtools flagstat
Update cufflinks wrapper with correct version exit codes
Remove unused method
Added some picard metrics to summary
Fix cryptic pipeline errors caused by using directory as output files
Fix sickle in unit tests
Move sickle summary methods to general sickle extension
Remove unused imports
Moved summary methods to general cutadept
fix version on fastqsync
diffrent nesting and emty files / data are now not writen
Remove chunked files from summary
RscriptCommandlinefunction mock
Changes to conform to Scala syntax
Make all module within one qscript
Fix chunking bug on vcfstats
Fix on adapters
Add notes
Merge branch 'develop' of git.lumc.nl:biopet/biopet into feature-cnvpipeline
cnMOPS Work in Progress
Remove old summary code
Merge branch 'develop' into feature-summary
Merge branch 'develop' into feature-gentrap
Merge branch 'patch-ide_files' into 'develop'
Added output Files
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