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Created with Raphaël 2.2.02Jun129May28272619181413121110974130Apr2928232016151413121098764230Mar2726252423201918171615141312111098765432127Feb26Merge branch 'macs2_change-options' into 'develop'Remove unused importsAdding a bit more loggingAdded a min methodChange method to EnumAdded documantation to help functionFixing max optionAdding max optionAdding optional default reference_nametitan R script update.. Now working version on cluster based on Titan version 1.40Merge branch 'fix-hiden_error_msg' into 'develop'bam2wig grammarbam2wig requirementscorrect output dir for toucanFix for mapping docsShow all lines that do not belong to a stacktrace nowspellingRewrote mapping documentationSHiva docs for #161titan R script update..Switch unit tests to reference moduleCode style fixSwitched to reference moduleFixed config bugUpdate the tables with sortable indication and pull all online resources to jar for offline usage.Theme the biopet report with bootstrap, sortable tables.Merge branch 'patch-picard_summary' into 'develop'Fixed reference summary in MappingFixed grouping contentChange stats to histogramfixed group functionChange method singatureAdded Some() support to anyToJsonAdded functions to difrent formatsUpdate some links in README.mdTitan script unmodified exampleAdding report to shiva pipelineFix version issuestash workbookTitan script unmodified example