Skip to content
Snippets Groups Projects
Select Git revision
  • biopet-bios
  • develop
  • epic-BIOPET-669
  • example-tarextract
  • fix-BIOPET-245
  • fix-BIOPET-593
  • fix-BIOPET-724
  • fix-BIOPET-728
  • fix-BIOPET-730
  • fix-BIOPET-782
  • gonl-GRCh38
  • master default
  • v0.9.0
  • v0.8.0
  • BIOS
  • v0.7.0
  • v0.6.0
  • v0.5.0
  • v0.4.0
  • v0.4.0-RC2
  • v0.4.0-RC1
  • v0.3.2
  • v0.3.1
  • v0.3.0
  • v0.2.0
  • start-feature-branching
  • v0.1.4
  • v0.1.2
  • v0.1.1
  • v0.1.0
  • 0.1.0
31 results
You can move around the graph by using the arrow keys.
Created with Raphaël 2.2.03Mar2127Feb2624231918171615141312111096543230Jan2928272623222120191615141312109865Move Gentrap-specific scripts and their wrappers to the Gentrap packageUpdate makeMergeTableFunction to return the created jobFix optional MergeTables flag errorsAdd merge jobs for cufflinks outputsAdd symlink jobs for cufflinks outputsDisabled some plots, we fix this laterAdded function to acces the qscript from a summarizeable to add multiple summarizeables to the qscriptAdded even more unit tests, now 1408 for gatk pipeline, sadly no 1337Added place holders for summaryMerge branch 'develop' into feature-shivaAdded unit test to gatk part of shivaAdded log4j to supress test outputAdded unit test to do some magicAdd MergeTable jobs for gene and exon fragment countsUpdate exon fragment count extensionAdd biopet wrapper for MergeTablesAdded more testsUpdate Gentrap with new Summarizable Sample and LibraryFix nameAdding basic unit testsChange memory of SeqStatFormatting fixAdd MergeTables to main tool executables listMerge branch 'develop' into feature-gentrapMerge branch 'patch-mutisample_summary' into 'develop'Change in scala docsFormat changeFormat changeUpdated commentAdd MergeTables unit testingUpdate input prep function and main functionRemove extension stripping from mergeTablesAdd checks for feature ID and value index when parsingInitial working version of table merging toolUpdate scopt dependencyAdded bcftoolsAdd todo'sAdd default function to add summarizableFix summary cufflink FPKMs pointing to the same objectMake samples and libraries Summarizable