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Created with Raphaël 2.2.010Mar9875432129Feb262524232221181716151211109875432129Jan28272625232221201918171514121110865430Dec29282625242322211817161514131110764Add yaml example and how to give multiple controls to one sampleMerge branch 'feature-mergesvcalls' into 'develop' Merge branch 'feature-toucan_summary' into 'develop' refactor docsrefactor in error messagerefactor to `configNamespace`Merge branch 'develop' into feature-small_rnaMerge branch 'fix-cutadapt' into 'develop' Merge branch 'feature-docs-0.6.0' into 'develop' Changed the cutadapt so the config will always load, even when fastqc data is no yet avilableFix report, path contained the wrong name.Merge branch 'feature-docs-0.6.0' of git.lumc.nl:biopet/biopet into feature-docs-0.6.0Merge branch 'develop' into feature-docs-0.6.0styleChange executable from pysvtools for SV merging.Fixed default valueMerge branch 'develop' into feature-mergesvcallsMerge branch 'develop' into fix-pindel-vcf-dependencyMerge branch 'tests-increase_utilcoverage' into 'develop' Merge branch 'fix-gentrap_tests' into 'develop' Fix threading issue in unit testsMerge branch 'fix-sv_unit_tests' into 'develop' Merge branch 'fix-validator' into 'develop' Merge branch 'feature-sample_selector' into 'develop' Merge branch 'fix-vcffilter-extension' into 'develop' Change insertsize page textFixed testsFixed styleFixed styleFixed unit testsAdded scala docsLoosed the encoding checksFixed layoutthe whole shebang in one generatorAdded sample selector when fasta file can't be found in the configAuto style changesFixed tests on OSXMerge branch 'fix-vcffilter-extension-peter' into 'fix-vcffilter-extension' Merge branch 'fix-basecounter_executable' into 'develop' Merge branch 'fix-readgroup_check' into 'develop'