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biopet.biopet
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1f86415345f07be6ab7f4efb6082921dcdeb8739
Select Git revision
Branches
12
biopet-bios
develop
epic-BIOPET-669
example-tarextract
fix-BIOPET-245
fix-BIOPET-593
fix-BIOPET-724
fix-BIOPET-728
fix-BIOPET-730
fix-BIOPET-782
gonl-GRCh38
master
default
Tags
19
v0.9.0
v0.8.0
BIOS
v0.7.0
v0.6.0
v0.5.0
v0.4.0
v0.4.0-RC2
v0.4.0-RC1
v0.3.2
v0.3.1
v0.3.0
v0.2.0
start-feature-branching
v0.1.4
v0.1.2
v0.1.1
v0.1.0
0.1.0
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Created with Raphaël 2.2.0
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Update Cufflinks wrapper
Refactor HTSeq-count jobs creation and its output access
Merge branch 'feature-bamToBigWig' into 'develop'
Convert flexiprep testing to DataProvider
Added star-2pass and stampy to data provider, not having 192 unit tests
Fix some config values
Added 128 unit tests to mapping pipeline
Fix typos
Fix "/" format errors
Make reference absolute
Make outputDir always absolute
Breakdancer vcf should output more headers, adding official header for SVs
Added asFile
Fix typo
Remove unneeded "/"
Format fix
Fix error message
Merge branch 'develop' of git.lumc.nl:biopet/biopet into feature-cnvpipeline
FreeC wrapper
Change name checkExecutable to preProcesExecutable
Rename afterGraph to beforeGraph
Fix some small bugs
Added flexiprep testing
Fix RPKM directory path from config
Change globalConfig to def
Format fix
Change outputDir to File
Add exon read count mode
Add option to supply strandedness protocol
adding VCFWithVCF
Add strandedness enum values
Update general structure
Add possible expression measures
Update config retrieval
Remove unused Gentrap values
Formatting
Merge branch 'develop' into feature-gentrap
Merge branch 'develop' into feature-unittest_core
Merge branch 'feature-fix_missing_values' into 'develop'
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