Commits · ea7bdf429eb7ada5a2c203bed5d509bca71efd87 · Mirrors / biopet.biopet

Apr 08, 2016
- Added contig · ea7bdf42
  Peter van 't Hof authored 8 years ago
  
  ea7bdf42
- Adding snptestToVcf to pipeline · cfcb5527
  Peter van 't Hof authored 8 years ago
  
  cfcb5527
- Added snptest parsing · 400d1a15
  Peter van 't Hof authored 8 years ago
  
  400d1a15
- Added framework for SnptestToVcf · 48edf17b
  Peter van 't Hof authored 8 years ago
  
  48edf17b
Apr 07, 2016
- Fix compile error · 6e7e0422
  Peter van 't Hof authored 8 years ago
  
  6e7e0422
Apr 06, 2016
- Added more args · 44731da1
  Peter van 't Hof authored 8 years ago
  
  44731da1
Apr 05, 2016
- Added more args · 5044b1d5
  Peter van 't Hof authored 8 years ago
  
  5044b1d5
Apr 01, 2016
- Fixed chr vcf files · d73d2e94
  Peter van 't Hof authored 8 years ago
  
  d73d2e94
- Style changes · 44654f47
  Peter van 't Hof authored 8 years ago
  
  44654f47
- Added contig based merge step · 21f352a2
  Peter van 't Hof authored 8 years ago
  
  21f352a2
Mar 30, 2016
- Fixed main class · cd1dbb8e
  Peter van 't Hof authored 8 years ago
  
  cd1dbb8e
- Optimize imports · 14b2a54a
  Peter van 't Hof authored 8 years ago
  
  14b2a54a
- Switch to CatVariants · 430fe7f0
  Peter van 't Hof authored 8 years ago
  
  430fe7f0
Mar 29, 2016
- Raise memory · 57a6dcd0
  Peter van 't Hof authored 8 years ago
  
  57a6dcd0
- Added auto `sortInput` on retry · 4e6b4240
  Peter van 't Hof authored 8 years ago
  
  4e6b4240
- Fixed sorting issue · db1a6755
  Peter van 't Hof authored 8 years ago
  
  db1a6755
- Adding sorting on input files · 8366185e
  Peter van 't Hof authored 8 years ago
  
  8366185e
Mar 25, 2016
- Added output file to snptest · ffa83468
  Peter van 't Hof authored 8 years ago
  
  ffa83468
- Added base version of snptest · 495a62d3
  Peter van 't Hof authored 8 years ago
  
  495a62d3
- Added test when all files are there · 73b71f72
  Peter van 't Hof authored 8 years ago
  
  73b71f72
- Raised memory · 631e16d5
  Peter van 't Hof authored 8 years ago
  
  631e16d5
- Fix style warnings · 48f983ae
  Peter van 't Hof authored 8 years ago
  
  48f983ae
- Correct incorrect format of indels · e4b00c4a
  Peter van 't Hof authored 8 years ago
  
  e4b00c4a
- Added contig check · f58c56c0
  Peter van 't Hof authored 8 years ago
  
  f58c56c0
- Added checks · 2b8efdd5
  Peter van 't Hof authored 8 years ago
  
  2b8efdd5
- Added spec validation · ea03c880
  Peter van 't Hof authored 8 years ago
  
  ea03c880
- Changed sample ID · d3851377
  Peter van 't Hof authored 8 years ago
  
  d3851377
- Added index as output file · 2f744f00
  Peter van 't Hof authored 8 years ago
  
  2f744f00
Mar 21, 2016
- Fixed scattering · d891d46f
  Peter van 't Hof authored 9 years ago
  
  d891d46f
- Fixed extension · 7087956f
  Peter van 't Hof authored 9 years ago
  
  7087956f
- Fixed version · dc88ef62
  Peter van 't Hof authored 9 years ago
  
  dc88ef62
- Tests · 0f8dafb1
  Peter van 't Hof authored 9 years ago
  
  0f8dafb1
- Added gwastest to executable · c774f02c
  Peter van 't Hof authored 9 years ago
  
  c774f02c
- Style fixes · c4c2a725
  Peter van 't Hof authored 9 years ago
  
  c4c2a725
- Merge remote-tracking branch 'remotes/origin/develop' into feature-snp_test · dd49ef79
  Peter van 't Hof authored 9 years ago
  
  dd49ef79
- Merge branch 'release-0.6.0' into 'develop' · 0906f14b
  Peter van 't Hof authored 9 years ago
  
  Release 0.6.0 This is to merge back changes on the release branch to develop again. First !362 should be done See merge request !363
  0906f14b
- Bump version to 0.7.0-SNAPSHOT · b8219d01
  Peter van 't Hof authored 9 years ago
  
  b8219d01
- Bumb version to 0.6.0 · 1a7004b1
  Peter van 't Hof authored 9 years ago
  
  1a7004b1
Mar 19, 2016
- Fix memory · 555cfb5a
  Peter van 't Hof authored 9 years ago
  
  555cfb5a
Mar 18, 2016
- Raised memory · 45e9ba01
  Peter van 't Hof authored 9 years ago
  
  45e9ba01