Commit e76f0625 authored by bow's avatar bow
Browse files

Update wrong output file names

parent 3223c73b
......@@ -35,7 +35,7 @@ trait CufflinksProducer { this: Gentrap#Sample =>
lazy val name: String = cuffType match {
case CufflinksStrict => "cufflinks_strict"
case CufflinksGuided => "cufflinks_guided"
case CufflinksBlind => "cufflinks_blin"
case CufflinksBlind => "cufflinks_blind"
case otherwise => throw new IllegalStateException("Unexpected cufflinks type: " + otherwise.toString)
}
......@@ -74,7 +74,7 @@ trait CufflinksProducer { this: Gentrap#Sample =>
lazy val isoformFpkmJob: Ln = {
val job = new Ln(pipeline)
job.input = cufflinksJob.outputIsoformsFpkm
job.output = new File(cufflinksJob.output_dir, s"$sampleId.isoformss_fpkm_$name")
job.output = new File(cufflinksJob.output_dir, s"$sampleId.isoforms_fpkm_$name")
job
}
}
......
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