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biopet.biopet
Commits
e16d2e05
Commit
e16d2e05
authored
Feb 08, 2016
by
Peter van 't Hof
Browse files
Raise memory of varscan
parent
2654e5c6
Changes
1
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public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/varscan/VarscanMpileup2cns.scala
View file @
e16d2e05
...
...
@@ -39,7 +39,7 @@ class VarscanMpileup2cns(val root: Configurable) extends Varscan {
var
vcfSampleList
:
Option
[
File
]
=
config
(
"vcf_sample_list"
)
var
variants
:
Option
[
Int
]
=
config
(
"variants"
)
override
def
defaultCoreMemory
=
6
.0
override
def
defaultCoreMemory
=
8
.0
override
def
beforeGraph
()
:
Unit
=
{
val
validValues
:
Set
[
Int
]
=
Set
(
0
,
1
)
...
...
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