Skip to content

GitLab

Explore

Sign in

Primary navigation

Project

B

biopet.biopet
- Activity
- Members
- Environments

Snippets Groups Projects

e031256a

Commit e031256a authored 10 years ago by Peter van 't Hof

Downloads
- Patches
- Plain Diff

Skipped compiling step at init phase of pipeline

parent 5b01a7d9

No related branches found

No related tags found

No related merge requests found

Changes 5

Hide whitespace changes

Inline Side-by-side

Showing

biopet-framework/src/main/java/nl/lumc/sasc/biopet/core/BiopetQCommandLine.scala 298 additions, 0 deletions

...in/java/nl/lumc/sasc/biopet/core/BiopetQCommandLine.scala
biopet-framework/src/main/java/nl/lumc/sasc/biopet/core/PipelineCommand.scala 12 additions, 10 deletions

.../main/java/nl/lumc/sasc/biopet/core/PipelineCommand.scala
flexiprep/src/main/java/nl/lumc/sasc/biopet/pipelines/flexiprep/Flexiprep.scala 1 addition, 1 deletion

...a/nl/lumc/sasc/biopet/pipelines/flexiprep/Flexiprep.scala
gatk/src/main/java/nl/lumc/sasc/biopet/pipelines/gatk/Gatk.scala 1 addition, 1 deletion

...c/main/java/nl/lumc/sasc/biopet/pipelines/gatk/Gatk.scala
mapping/src/main/java/nl/lumc/sasc/biopet/pipelines/mapping/Mapping.scala 1 addition, 1 deletion

.../java/nl/lumc/sasc/biopet/pipelines/mapping/Mapping.scala

with 313 additions and 13 deletions

Loading

0% Loading or .

You are about to add 0 people to the discussion. Proceed with caution.

Finish editing this message first!

Please register or sign in to comment