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biopet.biopet
Commits
de4597aa
Commit
de4597aa
authored
Mar 25, 2015
by
Peter van 't Hof
Browse files
fixed var
parent
56c00f29
Changes
1
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public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/BiopetCommandLineFunctionTrait.scala
View file @
de4597aa
...
...
@@ -68,7 +68,7 @@ trait BiopetCommandLineFunctionTrait extends CommandLineFunction with Configurab
if
(
config
.
contains
(
"memory_limit"
))
memoryLimit
=
config
(
"memory_limit"
)
else
memoryLimit
=
Some
(
coreMemory
*
threads
)
if
(
config
.
contains
(
"resident_limit"
))
memory
Limit
=
config
(
"resident_limit"
)
if
(
config
.
contains
(
"resident_limit"
))
resident
Limit
=
config
(
"resident_limit"
)
else
residentLimit
=
Some
((
coreMemory
+
(
0.5
*
retry
))
*
ressFactor
)
if
(!
config
.
contains
(
"vmem"
))
vmem
=
Some
((
coreMemory
*
(
vmemFactor
+
(
0.5
*
retry
)))
+
"G"
)
...
...
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