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Commit d9396e61 authored by Peter van 't Hof's avatar Peter van 't Hof
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Fixed mapping report

parent 766209e0
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mapping/src/main/scala/nl/lumc/sasc/biopet/pipelines/mapping/MappingReport.scala
View file @ d9396e61
......@@ -33,8 +33,8 @@ object MappingReport extends ReportBuilder {
/** Name of report */
val reportName = "Mapping Report"
override def extFiles = super.extFiles ++ List("js/gears.js")
.map(x => ExtFile("/nl/lumc/sasc/biopet/pipelines/gears/report/ext" + x, x))
override def extFiles = super.extFiles ++ List("js/gears.js", "js/krona-2.0.js", "img/krona/loading.gif", "img/krona/hidden.png", "img/krona/favicon.ico")
.map(x => ExtFile("/nl/lumc/sasc/biopet/pipelines/gears/report/ext/" + x, x))
def krakenExecuted = summary.getValue(sampleId, libId, "gears", "stats", "krakenreport").isDefined
......
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