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biopet.biopet
Commits
c6ebdcae
Commit
c6ebdcae
authored
Oct 16, 2015
by
Peter van 't Hof
Browse files
Style fix
parent
aec67d97
Changes
2
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public/gentrap/src/test/scala/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala
View file @
c6ebdcae
...
...
@@ -70,7 +70,7 @@ abstract class GentrapTestAbstract(val expressionMeasure: String) extends TestNG
.
toMap
)
val
validExpressionMeasures
=
Set
(
val
validExpressionMeasures
=
Set
(
"fragments_per_gene"
,
"fragments_per_exon"
,
"bases_per_gene"
,
"bases_per_exon"
,
"cufflinks_strict"
,
"cufflinks_guided"
,
"cufflinks_blind"
)
...
...
public/mapping/src/test/scala/nl/lumc/sasc/biopet/pipelines/mapping/MappingTest.scala
View file @
c6ebdcae
...
...
@@ -15,7 +15,7 @@
*/
package
nl.lumc.sasc.biopet.pipelines.mapping
import
java.io.
{
File
,
FileOutputStream
}
import
java.io.
{
File
,
FileOutputStream
}
import
com.google.common.io.Files
import
nl.lumc.sasc.biopet.pipelines.flexiprep.Fastqc
...
...
@@ -25,7 +25,7 @@ import org.apache.commons.io.FileUtils
import
org.broadinstitute.gatk.queue.QSettings
import
org.scalatest.Matchers
import
org.scalatest.testng.TestNGSuite
import
org.testng.annotations.
{
AfterClass
,
DataProvider
,
Test
}
import
org.testng.annotations.
{
AfterClass
,
DataProvider
,
Test
}
/**
* Test class for [[Mapping]]
...
...
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