Config changed

.../nl/lumc/sasc/biopet/core/BiopetCommandLineFunction.scala

...n/scala/nl/lumc/sasc/biopet/core/BiopetQCommandLine.scala

...c/main/scala/nl/lumc/sasc/biopet/core/BiopetQScript.scala

...work/src/main/scala/nl/lumc/sasc/biopet/core/Config.scala

...c/main/scala/nl/lumc/sasc/biopet/core/config/Config.scala

...n/scala/nl/lumc/sasc/biopet/core/config/ConfigValue.scala

...la/nl/lumc/sasc/biopet/core/config/ConfigValueIndex.scala

.../scala/nl/lumc/sasc/biopet/core/config/Configurable.scala

...work/src/main/scala/nl/lumc/sasc/biopet/function/Ln.scala

...lumc/sasc/biopet/function/PythonCommandLineFunction.scala

...src/main/scala/nl/lumc/sasc/biopet/function/Sha1sum.scala

...rk/src/main/scala/nl/lumc/sasc/biopet/function/Zcat.scala

flexiprep/README.md

flexiprep/examples/test.json

flexiprep/pom.xml

...n/scala/nl/lumc/sasc/biopet/function/fastq/Cutadapt.scala

...ain/scala/nl/lumc/sasc/biopet/function/fastq/Fastqc.scala

...ain/scala/nl/lumc/sasc/biopet/function/fastq/Sickle.scala

...a/nl/lumc/sasc/biopet/pipelines/flexiprep/Flexiprep.scala

...c/sasc/biopet/pipelines/flexiprep/scripts/FastqSync.scala