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Commit c1aab8a6 authored by Wai Yi Leung's avatar Wai Yi Leung
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Fix sambamba, all config must derive from 1 key only: "sambamba" (for all sub commands)

Not required to have sambamba stick to a certain pipeline
parent c15b307b
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......@@ -24,7 +24,7 @@ abstract class Sambamba extends BiopetCommandLineFunction {
override def subPath = "sambamba" :: super.subPath
executable = config("exe", default = "sambamba", freeVar = false)
executable = config("exe", default = "sambamba", submodule = "sambamba")
override def versionCommand = executable
override def versionRegex = """sambamba v(.*)""".r
override def versionExitcode = List(0, 1)
......
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