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biopet.biopet
Commits
b248300c
Commit
b248300c
authored
Sep 17, 2015
by
Peter van 't Hof
Browse files
Rename header
parent
c7b0392c
Changes
1
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public/carp/src/main/scala/nl/lumc/sasc/biopet/pipelines/carp/CarpReport.scala
View file @
b248300c
...
...
@@ -76,7 +76,7 @@ object CarpReport extends MultisampleReportBuilder {
),
List
(
"Alignment"
->
ReportSection
(
"/nl/lumc/sasc/biopet/pipelines/bammetrics/alignmentSummary.ssp"
,
if
(
summary
.
libraries
(
sampleId
).
size
>
1
)
Map
(
"showPlot"
->
true
)
else
Map
()),
"
Preprocessing
"
->
ReportSection
(
"/nl/lumc/sasc/biopet/pipelines/bammetrics/alignmentSummary.ssp"
,
Map
(
"sampleLevel"
->
true
)),
"
Merged
"
->
ReportSection
(
"/nl/lumc/sasc/biopet/pipelines/bammetrics/alignmentSummary.ssp"
,
Map
(
"sampleLevel"
->
true
)),
"QC reads"
->
ReportSection
(
"/nl/lumc/sasc/biopet/pipelines/flexiprep/flexiprepReadSummary.ssp"
),
"QC bases"
->
ReportSection
(
"/nl/lumc/sasc/biopet/pipelines/flexiprep/flexiprepBaseSummary.ssp"
)
),
args
)
...
...
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