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Commit b0774761 authored by bow's avatar bow
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Merge branch 'release-0.3.0'

parents 19d495c5 25d3f569
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.gitignore
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......@@ -7,7 +7,8 @@ git.properties
# Vim
*.swp
# IntelliJ
.idea/workspace.xml
/target/
/public/target/
/protected/target/
.idea/*
*.iml
target/
public/target/
protected/target/
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<?xml version="1.0" encoding="UTF-8"?>
<project version="4">
<component name="CompilerConfiguration">
<option name="DEFAULT_COMPILER" value="Javac" />
<resourceExtensions />
<wildcardResourcePatterns>
<entry name="!?*.java" />
<entry name="!?*.form" />
<entry name="!?*.class" />
<entry name="!?*.groovy" />
<entry name="!?*.scala" />
<entry name="!?*.flex" />
<entry name="!?*.kt" />
<entry name="!?*.clj" />
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<processorPath useClasspath="true" />
</profile>
<profile default="false" name="Maven default annotation processors profile" enabled="true">
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<sourceTestOutputDir name="target/generated-test-sources/test-annotations" />
<outputRelativeToContentRoot value="true" />
<processorPath useClasspath="true" />
<module name="BamMetrics" />
<module name="Basty" />
<module name="BiopetFramework" />
<module name="BiopetGatkExtensions" />
<module name="BiopetGatkPipelines" />
<module name="BiopetProtectedPackage" />
<module name="BiopetPublicPackage" />
<module name="Flexiprep" />
<module name="Gentrap" />
<module name="Mapping" />
<module name="Sage" />
<module name="Yamsvp" />
</profile>
</annotationProcessing>
</component>
</project>
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<component name="CopyrightManager">
<settings default="" />
</component>
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<?xml version="1.0" encoding="UTF-8"?>
<project version="4">
<component name="Encoding" useUTFGuessing="true" native2AsciiForPropertiesFiles="false">
<file url="file://$PROJECT_DIR$" charset="UTF-8" />
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</project>
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</SOURCES>
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</component>
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<component name="libraryTable">
<library name="Maven: com.beust:jcommander:1.27">
<CLASSES>
<root url="jar://$MAVEN_REPOSITORY$/com/beust/jcommander/1.27/jcommander-1.27.jar!/" />
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<root url="jar://$MAVEN_REPOSITORY$/com/beust/jcommander/1.27/jcommander-1.27-sources.jar!/" />
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</library>
</component>
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<component name="libraryTable">
<library name="Maven: com.github.julien-truffaut:monocle-core_2.11:0.5.0">
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<JAVADOC>
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</JAVADOC>
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</SOURCES>
</library>
</component>
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<component name="libraryTable">
<library name="Maven: com.github.scopt:scopt_2.10:3.2.0">
<CLASSES>
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</component>
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</SOURCES>
</library>
</component>
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</JAVADOC>
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</SOURCES>
</library>
</component>
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<component name="libraryTable">
<library name="Maven: com.google.guava:guava:18.0">
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</SOURCES>
</library>
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<CLASSES>
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</SOURCES>
</library>
</component>
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</JAVADOC>
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<root url="jar://$MAVEN_REPOSITORY$/commons-codec/commons-codec/1.3/commons-codec-1.3-sources.jar!/" />
</SOURCES>
</library>
</component>
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</component>
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<library name="Maven: commons-httpclient:commons-httpclient:3.1">
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