Moved config to utils

.../lumc/sasc/biopet/pipelines/flexiprep/FlexiprepTest.scala

...ain/scala/nl/lumc/sasc/biopet/pipelines/gears/Gears.scala

...scala/nl/lumc/sasc/biopet/pipelines/gentrap/Gentrap.scala

...nl/lumc/sasc/biopet/pipelines/gentrap/GentrapReport.scala

...c/biopet/pipelines/gentrap/extensions/CustomVarScan.scala

...c/sasc/biopet/pipelines/gentrap/extensions/Pdflatex.scala

.../biopet/pipelines/gentrap/extensions/RawBaseCounter.scala

...sasc/biopet/pipelines/gentrap/scripts/AggrBaseCount.scala

...mc/sasc/biopet/pipelines/gentrap/scripts/Hist2Count.scala

...t/pipelines/gentrap/scripts/PdfReportTemplateWriter.scala

...c/sasc/biopet/pipelines/gentrap/scripts/PlotHeatmap.scala

.../lumc/sasc/biopet/pipelines/gentrap/scripts/PlotPca.scala

...a/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala

...l/lumc/sasc/biopet/pipelines/kopisu/ConiferPipeline.scala

...nl/lumc/sasc/biopet/pipelines/kopisu/ConiferSummary.scala

...n/scala/nl/lumc/sasc/biopet/pipelines/kopisu/Kopisu.scala

...scala/nl/lumc/sasc/biopet/pipelines/mapping/Mapping.scala

...nl/lumc/sasc/biopet/pipelines/mapping/MappingReport.scala

.../biopet/pipelines/mapping/scripts/TophatRecondition.scala

...a/nl/lumc/sasc/biopet/pipelines/mapping/MappingTest.scala