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biopet.biopet
Commits
a3c21103
Commit
a3c21103
authored
May 17, 2016
by
Peter van 't Hof
Browse files
Fixed output
parent
9bc45be2
Changes
1
Hide whitespace changes
Inline
Side-by-side
biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/GtfToGenePred.scala
View file @
a3c21103
...
...
@@ -36,5 +36,5 @@ class GtfToGenePred(val root: Configurable) extends BiopetCommandLineFunction {
conditional
(
simple
,
"-simple"
)
+
conditional
(
geneNameAsName2
,
"-geneNameAsName2"
)
+
repeat
(
inputGtfs
)
+
(
if
(
outputAsStsout
)
""
else
" > "
+
required
(
outputGenePred
))
(
if
(
outputAsStsout
)
required
(
"/dev/stdout"
)
else
required
(
outputGenePred
))
}
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