Commit a0e4262d authored by bow's avatar bow
Browse files

Update default memory settings

parent 10363d74
......@@ -15,6 +15,8 @@ class CollectMultipleMetrics(val root: Configurable) extends Picard with Summari
javaMainClass = new picard.analysis.CollectMultipleMetrics().getClass.getName
override val defaultCoreMemory = 6.0
@Input(doc = "The input SAM or BAM files to analyze", required = true)
var input: File = null
......
......@@ -36,7 +36,7 @@ class BiopetFlagstat(val root: Configurable) extends ToolCommandFuntion with Sum
@Output(doc = "summary output file", shortName = "output", required = false)
var summaryFile: File = _
override val defaultCoreMemory = 2.0
override val defaultCoreMemory = 6.0
override def commandLine = super.commandLine + required("-I", input) + required("-s", summaryFile) + " > " + required(output)
......
......@@ -32,7 +32,7 @@ class MergeTables(val root: Configurable) extends ToolCommandFuntion {
javaMainClass = getClass.getName
override val defaultCoreMemory = 2.0
override val defaultCoreMemory = 6.0
/** List of input tabular files */
@Input(doc = "Input table files", required = true)
......
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