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9bb14daa

Commit 9bb14daa authored 10 years ago by bow

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Merge branch 'patch-shiva' into 'release-0.3.0'

Patch shiva

See merge request !131

parents 0267b656 e0ed3259

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public/bammetrics/src/main/scala/nl/lumc/sasc/biopet/pipelines/bammetrics/BamMetrics.scala 3 additions, 2 deletions

...nl/lumc/sasc/biopet/pipelines/bammetrics/BamMetrics.scala
public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/extensions/bedtools/BedtoolsCoverage.scala 2 additions, 0 deletions

...mc/sasc/biopet/extensions/bedtools/BedtoolsCoverage.scala
public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/BedToInterval.scala 0 additions, 8 deletions

.../main/scala/nl/lumc/sasc/biopet/tools/BedToInterval.scala
public/shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaTrait.scala 1 addition, 1 deletion

...cala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaTrait.scala

with 6 additions and 11 deletions

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