Skip to content
Snippets Groups Projects
Commit 96137126 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

fix name

parent ad33c271
No related branches found
No related tags found
No related merge requests found
Hide whitespace changes
Inline Side-by-side
gears/src/main/scala/nl/lumc/sasc/biopet/pipelines/gears/GearsReport.scala
+ 1
− 1
View file @ 96137126
...@@ -38,7 +38,7 @@ object GearsReport extends MultisampleReportBuilder { ...@@ -38,7 +38,7 @@ object GearsReport extends MultisampleReportBuilder {
def indexPage = { def indexPage = {
val krakenExecuted = summary.getSampleValues("gearskraken", "stats", "krakenreport").values.forall(_.isDefined) val krakenExecuted = summary.getSampleValues("gearskraken", "stats", "krakenreport").values.forall(_.isDefined)
val centrifugeExecuted = summary.getSampleValues("gearskraken", "stats", "centrifuge_report").values.forall(_.isDefined) val centrifugeExecuted = summary.getSampleValues("gearscentrifuge", "stats", "centrifuge_report").values.forall(_.isDefined)
val qiimeClosesOtuTable = summary.getValue("gears", "files", "pipeline", "qiime_closed_otu_table", "path") val qiimeClosesOtuTable = summary.getValue("gears", "files", "pipeline", "qiime_closed_otu_table", "path")
.map(x => new File(x.toString)) .map(x => new File(x.toString))
val qiimeOpenOtuTable = summary.getValue("gears", "files", "pipeline", "qiime_open_otu_table", "path") val qiimeOpenOtuTable = summary.getValue("gears", "files", "pipeline", "qiime_open_otu_table", "path")
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment