Commit 936e77a0 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Fix single end dependency

parent 52928227
......@@ -177,6 +177,7 @@ class Flexiprep(val root: Configurable) extends QScript with SummaryQScript with
qcCmdR1.read = "R1"
qcCmdR1.output = if (paired) new File(fastqR1Qc.getAbsolutePath.stripSuffix(".gz"))
else fastqR1Qc
qcCmdR1.deps :+= fastqc_R1.output
qcCmdR1.isIntermediate = paired || !keepQcFastqFiles
addSummarizable(qcCmdR1, "qc_command_R1")
......
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